Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSS---LAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMA-MFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAALW
1NFQ Chain:A ((5-242))-----LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHG---YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTAL-------------GRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTVAGL-


General information:
TITO was launched using:
RESULT:

Template: 1NFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159538 for 1987 contacts (-80.3/contact) +
2D Compatibility (PS) -24999 + (NN) -3566 + (LL) 932
1D Compatibility (HY) -17600 + (ID) 4650
Total energy: -209421.0 ( -105.40 by residue)
QMean score : 0.433

(partial model without unconserved sides chains):
PDB file : Tito_1NFQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NFQ-query.scw
PDB file : Tito_Scwrl_1NFQ.pdb: