Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGDLPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIPVECP
5FD1 Chain:A ((2-74))
--FVVTDNCIKCKYTDCVEVCPVDCFYEGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPEDMQEFIQLNAEL---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5FD1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62018 for 510 contacts (-121.6/contact) +
2D Compatibility (PS) -7406 + (NN) -4592 + (LL) 1704
1D Compatibility (HY) -9600 + (ID) 1500
Total energy: -83412.0 ( -163.55 by residue)
QMean score : 0.293
(partial model without unconserved sides chains):
PDB file :
Tito_5FD1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5FD1-query.scw
PDB file :
Tito_Scwrl_5FD1.pdb
: