Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGDQELELRFDVPLYTLAEASRYLVVPRATLATWADGYERRPANAPAVQGQPIITALPHPTGSHARLPFVGIAEAYVLNAFRRAGVPMQRIRPSLDWLIKNVGPHALASQDLCTDGAEVLWRFAERSGEGSPDDLVVRGLIVPRSGQYVFKEIVEHYLQQISFADDNLASMIRLPQYGDANVVLDPRRGYGQPVFDGSGVRVADVLGPLRAGATFQAVADDYGVTPDQLRDALDAIAA |
1R8E Chain:A ((3-74)) | ------------ESYYSIGEVSKLANVSIKALRYYDKID----------LFKPAYVD---PDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQD---------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R8E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28678 for 455 contacts (-63.0/contact) +
2D Compatibility (PS) -7993 + (NN) -3237 + (LL) 9904
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -32554.0 ( -71.55 by residue)
QMean score : 0.403
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