Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTATASDDEAVTALALSAAKGNGRALEAFIKATQQDVWRFVAYLSDVGSADDLTQETFLRAIGAIPRFSARSSARTWLLAIARHVVADHIRHVRSRPRTTRGARPEHLIDGDRHARGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG |
2O8X Chain:B ((2-61)) | --------------------------------------------------------------------------------------------------------------------GFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLA--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28479 for 379 contacts (-75.1/contact) +
2D Compatibility (PS) -6523 + (NN) 363 + (LL) 8904
1D Compatibility (HY) -8800 + (ID) 2950
Total energy: -37485.0 ( -98.91 by residue)
QMean score : 0.453
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