Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAMVNTTTRLSDDALAFLSERHLAMLTTLRADNSPHVVAVGFTF-DPKTHIARVITTGGSQKAVNADRSGLAVLSQVDG--ARWLSLEGRAAVNSDIDAVRDAELRYAQRYRTP-RPNPRRVVIEVQIERVLGSADLLDRA
2RE7 Chain:A ((3-133))
-----SNQKHIDKIQAVIKDVKFAMISTSNKKGDIHAWPMTTSEVNLDNKEIWFIGDKTSDVVKDIQDDARIGLTYATQDEKNYVSISGDAELPTDKAKLDELWSPVYSAFFANGKEDANIQLIKVVPHGVECWLS-----
General information:
TITO was launched using:
RESULT:
Template:
2RE7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35699 for 875 contacts (-40.8/contact) +
2D Compatibility (PS) -14158 + (NN) -7439 + (LL) 1192
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -58904.0 ( -67.32 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_2RE7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RE7-query.scw
PDB file :
Tito_Scwrl_2RE7.pdb
: