Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQQSLAVKTFEDLFAELGDRARTRPADSTTVAALDGGVHALGKKLLEEAGEVWLAAEHESNDALAEEISQLLYWTQVLMISRGLSLDDVYRKL
1Y6X Chain:A ((7-93))
------VKTFEDLFAELGDRARTRPADSTTVAALDGGVHALGKKLLEEAGEVWLAAEHESNDALAEEISQLLYWTQVLMISRGLSLDDVYRKL
General information:
TITO was launched using:
RESULT:
Template:
1Y6X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18920 for 516 contacts (-36.7/contact) +
2D Compatibility (PS) -9502 + (NN) -5509 + (LL) 740
1D Compatibility (HY) -8000 + (ID) 3650
Total energy: -44841.0 ( -86.90 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_1Y6X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y6X-query.scw
PDB file :
Tito_Scwrl_1Y6X.pdb
: