Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIALLAPGQGSQTEGMLSPW-LQLPGAADQIAAWSKAADLDLARLGTTASTEEITDTAVAQPLIVAATLLAHQELARRC--VLAG-KDVIVAGHSVGEIAAYAIAGVIAADDAVALAATRGAEMAKACATEPTGMSAVLGGDETEVLSRLEQLDL----VPANRNAAGQIVAAGRLTALEK---LAEDPPAKARVRALGVAGAFHTEFMAPALDGFAAAAANIATADPTATLLSNRDGKPVTSAAAAMDTLVSQLTQPVRWDLCTATLREHTVTAIVEFPPAGTLSGIAKRELRGVPARAVKSPADLDELANL |
| 3TQE Chain:A ((8-291)) | -FAFVFPGQGSQHLGMLAELGLQQPIVLETFQQASSALAYDLWALVQHGPQERLDQTQFTQPALLTADVAIF-----RCWEALGGPKPQVMAGHSLGEYAALVCAGALKFEEAVKLVEKRGQYMQEAVPVGEGAMGAIIGLNEAEIESICENAALGQVVQPANLNSTDQTVISGHSEAVDRALNMAKTEGAKIAKR-IPVSVPSHCPLMQPAADRLAQDIAKISIDSPKVPVIHNVDVVDHNEANIIRGALIKQLVRPVRWVETIKYIEEQGIKVFMECGPDNKLAGLIKR---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TQE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148176 for 2456 contacts (-60.3/contact) +
2D Compatibility (PS) -29631 + (NN) -16281 + (LL) 2420
1D Compatibility (HY) -15600 + (ID) 4600
Total energy: -211868.0 ( -86.27 by residue)
QMean score : 0.463
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