Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDVLRTPDSRFEHLVGYPFAPHYVDVTAGDTQPLRMHYVDEGPGDGPPIVLLHGEPTWSYLYRTMIPPLSAAGHRVLAPDLIGFGRSDKPTRIEDYTYLRHVEWVTSWFENLDLHDVTLFVQDWGSLIGLRIAAEHGDRIARLVVANGFLPAAQGRTPLPFYVWRAFARYSPVLPAGRLVNFGTVHRVPAGVRAGYDAPFPDKTYQAGARAFPRLVPTSPDDPAVPANRAAWEALGRWDKPFLAIFGYRDPILGQADGPLIKHIPGAAGQPHARIKASHFIQEDSGTELAERMLSWQQAT |
| 3G9X Chain:A ((6-134)) | --------------TGFPFDPHYVEVLGE-----RMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHV-APSHRCIAPDLIGMGKSDKPDL--DYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRP----------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3G9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -106614 for 1001 contacts (-106.5/contact) +
2D Compatibility (PS) -13846 + (NN) -3517 + (LL) 9476
1D Compatibility (HY) -15200 + (ID) 3050
Total energy: -132751.0 ( -132.62 by residue)
QMean score : 0.477
|
|
|