Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGEGSRRPSGMLMSVDLEPVQLVGPDGTPTAERRYHRDLPEETLRWLYEMMVVTRELDTEFVNLQRQGELALYTPCRGQEAAQVGAAACLRKTDWLFPQYRELGVYLVRGIP--------PGHVGVAWRGTW---HGGLQFTTKCCAPMSVPIGTQTLHAVGAAMAAQRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQNNQWAISMPVSRQTAAPSIAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLIEAVTYRLGPHTTADDPTRYRSQEEVDRWATLD-PIPRYRTYLQDQGLWSQRLEEQVTARAKHVRSELRDAVFDA---PDFDVDEVFTTVYAEITPGLQAQREQLRAELARTD |
| 1X80 Chain:A ((42-386)) | --------------------QIINPSEDP--------HLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCK--ERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYR-------------------------DHPISRLRHYLLSQGWWD---EEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1X80.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140921 for 2425 contacts (-58.1/contact) +
2D Compatibility (PS) -33942 + (NN) -21893 + (LL) 3600
1D Compatibility (HY) -19600 + (ID) 6400
Total energy: -219156.0 ( -90.37 by residue)
QMean score : 0.413
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