Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------------------------------------MTDSEHVGKTCQ-------IDVLIEEHDER-TRAKARLSWAGRQM-VGVGLARLDP-ADEPVAQIGDELAIARALSDLAN-QLFALTSSDIEASTHQPVTGLHH------------------------------- |
4P79 Chain:A ((2-190)) | SEFMSVAVETFGFFMSALGLLMLGLTLSNSYWRVSTNTIFENLWYSCATDSLGV-SNCWDFPSMLALSGYVQGCRALMITAILLGFLGLFLGMVGLRATNVGNMDLSKKAKLLAIAGTLHILAGACGMVAISWYAVNITTDFFNPLYAGTKYELGPALYLGWSASLLSILGGICVFSTAAAS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P79.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 786 for 446 contacts (1.8/contact) +
2D Compatibility (PS) -9702 + (NN) -45 + (LL) -172
1D Compatibility (HY) 2400 + (ID) 150
Total energy: -6883.0 ( -15.43 by residue)
QMean score : 0.282
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