Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MNANRTSAQRLLAQAGGVSGLVYSSLPVVTFVVASSAAG---LLPAIGFALSMAGLILLWRLLRR-------------ESARPVVAGFCGVAVCALIAYLVGQSKGYF-----------------LLGIWMSLLWAVVFTLSILIRRPIVGYLWSWLSGRDRAWRDVSRAVFAFDVATLGWTLVFAAR--FIVQRHLYDADKTGWLGVARIGMGWPLTALAAL---------ATYAAIKAAQRAILASHDAAAVGGAAEFDADAGRE |
| 1GVN Chain:B ((2-273)) | ANIVNFTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIERYETMYADDPMTARATPKQAHDIVVKNLPTNLETLHKTGLFSDIRLYNREGVKLYSSLETPSISPKETLEKELNRKVSGKEIQPTLERIEQKMVLNKHQETPEFKAIQQKLESLQP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174500 for 1577 contacts (-110.7/contact) +
2D Compatibility (PS) -23937 + (NN) -7992 + (LL) 0
1D Compatibility (HY) 5200 + (ID) 1300
Total energy: -202529.0 ( -128.43 by residue)
QMean score : 0.194
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