Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNELVDTTEMYLRTIYDLEEEGVTPLRARIAERLDQSGPTVSQTVSRMERDGLLRVAGDRHLELTEKGRALAIAVMRKHRLAERLLVDVIGLPWEEVHAEACRWEHVMSEDVERRLVKVLNNPTTSPFGNPIPGLVELGVGPEPGADDANLVRLTELPAGSPVAVVVRQLTEHVQGDIDLITRLKDAGVVPNARVTVETTPGGGVTIVIPGHENVTLPHEMAHAVKVEKV
2QQA Chain:A ((3-226))
--DLVDTTAMYLRTIYELEEEGVTPLRARIAERLEQSGPTVSQTVARMERDGLVVVASDRSLQMTPTGRTLATAVMRKHRLAERLLTDIIGLDINKVHDEADRWEHVMSDEVERRLVKVLKDVSRSPFGNPIPGLDELGV--------APGTRVIDAATSMPRKVRIVQINEIFQVETDQFTQLLDADIRVGSEVEI-VDRDGHITLSHNG-KDVELLDDLAHTIRIEEL
General information:
TITO was launched using:
RESULT:
Template:
2QQA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102681 for 1697 contacts (-60.5/contact) +
2D Compatibility (PS) -24503 + (NN) -16876 + (LL) -252
1D Compatibility (HY) -19200 + (ID) 6400
Total energy: -169912.0 ( -100.12 by residue)
QMean score : 0.684
(partial model without unconserved sides chains):
PDB file :
Tito_2QQA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QQA-query.scw
PDB file :
Tito_Scwrl_2QQA.pdb
: