Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSATGPGIVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAAPKSYAATIRLGQTTSTEDAEGQVLQSVPAKHLTIEAIDAAMERLRGEIRQVPSSVSAIKVGGRRAYRLARQGRSVQLEARPIRIDRFELLAARRRDQLIDIDVEIDCSSGTYIRALARDLGDALGVGGHVTALRRTRVGRFELDQAR-SLDDLAERPALSLSLDEACLLMFARRDLTAAEASAAANGRSLPAVGIDGVYAACDADGRVIALLRDEGSRTRSVAVLRPATMHPG |
3LWQ Chain:A ((47-255)) | ------GVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSGVLPVALEKATRVVQALLPAGKEYVALMHLHGDVP----EDKIIQ--------------VMKEFEGEIIQR---------------------------LRTRKVYYIEVLEIEGRDVLFRVGVE----AGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVD---YYYFWKEDGIEEYFRKAIQPMEKAV----EHLPKVWI-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LWQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117967 for 1527 contacts (-77.3/contact) +
2D Compatibility (PS) -20499 + (NN) -2458 + (LL) 5752
1D Compatibility (HY) -15600 + (ID) 3800
Total energy: -154572.0 ( -101.23 by residue)
QMean score : 0.442
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