Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTRSREEYFNLPLKVDESSGTIGKMFVLVIYDISDNRRRASLAKILAGFGYRVQESAFEAMLTKGQLAKLVARIDRFAID-CDNIRIYKIRGVAAVTFYGRGRLVSAEEFVFF
1ZPW Chain:X ((2-83))
-----------------------GKRLYAVAYDIPDDTRRVKLANLLKSYGERVQLSVFECYLDERLLEDLRRRARRLLDLGQDALRIYPVAG--QVEVLGVGPLPE-------
General information:
TITO was launched using:
RESULT:
Template:
1ZPW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60252 for 504 contacts (-119.5/contact) +
2D Compatibility (PS) -9002 + (NN) -4916 + (LL) 2444
1D Compatibility (HY) -6000 + (ID) 1650
Total energy: -79376.0 ( -157.49 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_1ZPW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZPW-query.scw
PDB file :
Tito_Scwrl_1ZPW.pdb
: