Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTARPLSELVERGWAAALEPVADQ--VAHMGQFLRAEIAAGRRYLPAGSNVLRAFTF-PFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADLGYPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP
3ZOQ Chain:A ((3-220))
-------QLLQDSWWNQLKEEFEKPYYQELREMLKREYAEQTIY-PDSRDIFNALHYTSYDDVKVVILGQDPYHGPGQAQGLSFSVKPGVKQ-PPSLKNIFLELQQDIGCSIPNHGSLVSWAKQGVLLLNTVLTVRRGQANSHKGKGWERLTDRIIDVLSERERPVIFILWGRHAQMKKERIDTSKHFIIESTHPSPFSARNGFFGSRPFSRANAYLEKMGEAPIDW---
General information:
TITO was launched using:
RESULT:
Template:
3ZOQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123240 for 1726 contacts (-71.4/contact) +
2D Compatibility (PS) -23417 + (NN) -13106 + (LL) 980
1D Compatibility (HY) -22000 + (ID) 5050
Total energy: -185833.0 ( -107.67 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_3ZOQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZOQ-query.scw
PDB file :
Tito_Scwrl_3ZOQ.pdb
: