Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAAPTLQTIRLAPKALLHDHLDGGLRPATVLDIAGQVGYDDLPATDVDALASWFRTQSHSGSLERYLEPFSHTVAVMQ-TPEALYRVAFECAQDLAADSVVYAEVRFAPEL------------HISCGLSFDDVVDTVLTGFAAGEKACAADGQPITVRCLVTAMRHA-AMSREIAELAIRFRDKGVVGFDIAGAEAGHPPTR---HLDAFEYMRDHNARFTIHAGEAFGLPSIHEAIAFCGADRLGHGVRIVDDIDVDADGGFQLGRLAAILRDKRIPLELCPSSNVQTGAVASIAEHPFDLLARARFRVTVNTDNRLMSDTSMSLEMHRLVEAFGYGWSDLARFTVNAMKSAFIPFDQRLAIIDEVIKPRFAALMGHSE |
| 1A4M Chain:A ((7-333)) | -------------PKVELHVHLDGAIKPETILYFGKKRGIA-LPADTVEELRNII-GMDKPLSLPGFLAKFDYYMPVIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVDPMPWNQTEGDVTPDDVVDLVNQGLQEGEQAFG-----IKVRSILCCMRHQPSWSLEVLELCKKYNQKTVVAMDLAGDETIEGSSLFPGHVEAYEGAVKNGIHRTVHAGEVGSPEVVREAVDILKTERVGHGYHTIED-----------EALYNRLLKENMHFEVCPWSSYLTGAWDPKTTHAVVRFKNDKANYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSFLP------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A4M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203028 for 2756 contacts (-73.7/contact) +
2D Compatibility (PS) -33296 + (NN) -11865 + (LL) 3932
1D Compatibility (HY) -22400 + (ID) 5000
Total energy: -271657.0 ( -98.57 by residue)
QMean score : 0.401
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