Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -MFTGIASHAGALGAALVVLI---GAAILHDGPAAAD-----PNQDDRFLALLEKKEIPAVANVPRVIDAAHKVCRKLDGGMPVNDIVDGLRND-AYNIDPVMRLY---PVRLTT-----------------TMTR-FISAAVEIYCPNHHSKMAFAMANFEPGSNEPTHRVAASTRSAVNSGSDLRASVSDMTIMSPGWREPTGAMLASVLGAVRAGDPLIPNPPPIPVPPPAAQTLIPPPPIVAPP---PPRPAPPQQPPPP----PPEVE----PPAGVPQSGGAAGSGGAGSGGGGGGDGP--------------------------VEPSPARPMPPGFIRLAP |
4O6D Chain:A ((19-377)) | LYFQSNADTGCAIDISRQELRCGSGVFIHNDVEAWMDRYKYYPETPQGLAKIIQKAHKEGVCGLRSVSRLEHQMWEAVKDEL--NTLLKENGVDLSVVVEKQEGMYKSAPKRLTATANNTFVVDGPETKECPTQNRAWNSLEVEDFGFGLTSTRMFLKVRESNTTECDSKIIGTAVKNN-------LAIHSDLSYWIESRLNDTWKLERAVLGEVKSCT--WPETHTLWGDGILESDLIIPVTLAGPRSNHNRRPGYKTQNQGPWDEGRVEIDFDYCPGTTVTLSESCGHRGPATRTTTESGKLITDWCCRSCTLPPLRYQTDSGCWYGMEIRPQRHDEKTLVQSQVNA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4O6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -10467 for 1776 contacts (-5.9/contact) +
2D Compatibility (PS) -28840 + (NN) -26171 + (LL) 72
1D Compatibility (HY) -6000 + (ID) 2650
Total energy: -74056.0 ( -41.70 by residue)
QMean score : 0.051
|
|
|