Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRGTDEKYGLPPQPDSDRMTRRTLPVLGLAHELITPTLRQMADRLDPHMRPVVSYHLGWSDERGRPVNNNCGKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWALWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEA-----------TRELIRGQAADTAFES-RTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLPVTWTVAHGGSAGRRLAAWLVDETGSQTASDDELAAVAELIECGGGRRWASAEARRHVTQGIDMVARIGIPDRPAAELQDLAHYIVDRQA |
| 4LLS Chain:A ((59-284)) | --------------------------------------------------------------------TSGGKRLRGFLVLETARLHDIAAGEAIWSATAIEALHAYSLVHDDLPCMDNDDMRRGQPTVHKKWDDATAVLAGDALQTLAFELV-----THPGASASAEVRADLALSLARASGAQGMVLGQALDIAAETARAPLSLDEITRLQQGKTGALIGWSAQAGARLAQADTA---ALKRYAQALGLAFQIADDILDVTGDSAQVGKAVGKDASAGK----ATFVSLLGLDAARARAMSLIDE------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LLS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54573 for 1637 contacts (-33.3/contact) +
2D Compatibility (PS) -22902 + (NN) -13631 + (LL) 8572
1D Compatibility (HY) -6800 + (ID) 4500
Total energy: -93834.0 ( -57.32 by residue)
QMean score : 0.266
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