Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLFARYRDIVDST-ANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQQRK--------MWVDVLNQGI----EEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTAQQVGQQYLAIVLGGITKEGV
2GFN Chain:A ((8-158))
--------DERRRALADAVLALIAREGISAVTTRAVAEESGWSTGVLNHYFGSRHELLLAALRRAGDIQGDRYRTILDEEGAGPIEKLRNITASILPLDERRLAMTRVFL-----------FFYAEG----TARGEIAAFLARWRGVVRESVVAAQREGTVSTDLDADAV-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2GFN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78669 for 890 contacts (-88.4/contact) +
2D Compatibility (PS) -14319 + (NN) -6758 + (LL) 4624
1D Compatibility (HY) -3600 + (ID) 2150
Total energy: -100872.0 ( -113.34 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_2GFN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GFN-query.scw
PDB file :
Tito_Scwrl_2GFN.pdb
: