Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVYTGSDAGDHASAPQPSGSGSVPASVNVPGLVVAAVWAVGLVAGLVALTIGHLAVAAAALVVAVMAPWCRVAYIAHG----QHRVCGETLRGTPAGETASFPTGWRGLRFSTR
2JSB Chain:A ((1-21))
-------------------------------------------------------------------RWCVYAYVRVRGVLVRYRRCW--------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JSB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4937 for 58 contacts (-85.1/contact) +
2D Compatibility (PS) -1996 + (NN) -307 + (LL) 5796
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -3744.0 ( -64.55 by residue)
QMean score : -0.137
(partial model without unconserved sides chains):
PDB file :
Tito_2JSB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JSB-query.scw
PDB file :
Tito_Scwrl_2JSB.pdb
: