Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSELAASLLSRVILPRPGEPLDVRKLYLEESTTNARRAHAPTRTSLQIGAESEVSFATYFNAFPASYWRRWTTCKSVVLRVQVTGAGRVDVYRTKATGARIFVEGHDFTGTEDQPAAVETEVVLQPFEDGGWVWFDITTDTAVTLHSGGWYATSPAPGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHDQPNLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAM---HRF-AKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGLRAAEHGYPTVTLPGAAIWHMAWSDKDDAIDWQAYFHLRNRLVVAAMHWDGPKAQVIGLVRSHLKATLKHLACLEYSTVAIQNKAIDDFLAGPEHIFSILESALPQVHRIRKSYPDAVVLPAASELPPPLHKNKAMKPPVNPLVIGYRLARGIMHNLTAANPQHHRRPEFNVPTQDARWFLLCTVDGATVTTADGCGVVYRQRDRAKMFALLWQSLRRQRQLLKRFEEMRRIYRDALPTLSSKQKWETALLPAANQEPEHG |
| 2NXV Chain:A ((11-206)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------KDESTLMFSVCSL-VRDQAKYDRLLESFERFGFT-PDKAEFLAADNREGN------------------------QFHGFSWHKQMLPRC----KGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPLNH----SVTAQALH--ISDVF----GNDRR------------RGNVPCRVESLDECFLLMRRLKPVLN-SYDMQGFHYYGADLCLQAEFLGGRAYAID-FHLHHYGRA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NXV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88342 for 1539 contacts (-57.4/contact) +
2D Compatibility (PS) -20745 + (NN) -11054 + (LL) 30420
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -94021.0 ( -61.09 by residue)
QMean score : 0.269
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