Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAISFRPTADLVDDIGPDVRSCDLQFRQFGGRSQFAGPISTVRCFQDNALLKSVLSQPSAGGVLVIDGAGSLHTALVGDVIAELARSTGWTGLIVHGAVRDAAALRGIDIGIKALGTNPRKSTKTGAGERDVEITLGGVTFVPGDIAYSDDDGIIVV
3C8O Chain:B ((5-153))
-------TPDLCDAYPELVQVVEPMFSNFGGRDSFGGEIVTIKCFEDNSLVKEQVDKDGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYGCIRDVDVIAQTDLGVQALASHPLKTDKRGIGDLNVAVTFGGVTFRPGEFVYADNNGIIV-
General information:
TITO was launched using:
RESULT:
Template:
3C8O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104861 for 1292 contacts (-81.2/contact) +
2D Compatibility (PS) -17084 + (NN) -14413 + (LL) 812
1D Compatibility (HY) -15200 + (ID) 3350
Total energy: -154096.0 ( -119.27 by residue)
QMean score : 0.832
(partial model without unconserved sides chains):
PDB file :
Tito_3C8O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C8O-query.scw
PDB file :
Tito_Scwrl_3C8O.pdb
: