Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTVQAIRTVLFYLLLSASAFVWGTLSFFIAPILPFRARYRFVVQNWCRFAIWLTRVVAGIRYEVRGLENIPEKPCVILSKHQSTWETFFLSGFFEPLSQVLKRELLYVPFFGWALALLKPIAIDRSQPKLALKQLAKQGDECLKKGAWVLIFPEGTRIPVGQMGKFSRGGTALAVNAGLPVLPIAHNAGQYWPKAGWAKYPG-----TIQVVIGPAMHAEGEGPRAIAEL---NQRAEAWVSETMAEISPIQQRVSHPEPSVVS |
3D7E Chain:X ((37-83)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITNQRETTVVWDKTTGQPIANAIVWQSRQSSPI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D7E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7925 for 352 contacts (22.5/contact) +
2D Compatibility (PS) -6724 + (NN) 1649 + (LL) 15484
1D Compatibility (HY) 2000 + (ID) 200
Total energy: 20134.0 ( 57.20 by residue)
QMean score : 0.192
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