Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRYCVFGNPIGHSKSPLIHR----LFAEQTGEALVYDAQLAPLDDFPGFARRFFEQG-KGANVTVPFKEEAYRLVDELSERATRAGAVNTLIRLADGRLRGDNTDGAGLLRDLTANAGVELRGKRVLLLGAGGAVRGVLEPFLGECPAELLIANRTARKAVDLAERFADLGAVHGCGFAEVEGPFDLIVNGTSASLAGDVP---PLAQSVIEPGRTVCYDMMYAKEPTAFNRWAAERGAARTLDGLGMLVEQAAEAFFLWRGVRPASAPVLETLRRQLATV |
| 3PHH Chain:A ((3-260)) | LKSFGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLES--HIKSEFLHLGLSGANVTLPFKERAFQVCDKIKGIALECGAVNTLV-LENDELVGYNTDALGFYLSLK--------YQNALILGAGGSAKA-LACELKKQGLQVSVLNRSSR-GLDFFQR---LGC--DCFMEPPKSAFDLIINATSASLHNELPLNKEVLKGYFKEGK-LAYDLAYG-FLTPFLSLAKELKTPFQ-DGKDMLIYQAALSFEKFSASQIPYSKAFEVMRSVF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127392 for 2175 contacts (-58.6/contact) +
2D Compatibility (PS) -26201 + (NN) -7610 + (LL) 2080
1D Compatibility (HY) -18400 + (ID) 4600
Total energy: -182123.0 ( -83.73 by residue)
QMean score : 0.400
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