Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGERLMPLSLDLLRVFESAARQLSFTAAAEELGTTQPAVSQQIKRLEKELATPLFQRVHRGIVLTDAGQLLLRHVAAGLETIDAGIAALGARQRHEVLQVATDYAFAAYWLMPRLPRFHQAHPHLDVSLVTSERGLAGQRGDIDVAILFGDGRSKHGEAHRLFREEVFPVCSPRLVEGLQLPLAKAHLARLPMLHLKPAQHARWFDWPALFEALAI-DRQPIPAVLS----FDNYTLLIQAAIAGQGVAIGWRHLVDGLLEQGLLCRPIGESCLSR-YGYYAVLPERKRRQRLVDGFVDWLQAELQAGGA |
| 3HHF Chain:B ((8-207)) | ------------------------------------------------------------------------------------------------VLSVDSAMPMVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAG--DDSGLRARHLFDSRFRVIASPEYLAKHGTPQSTEELA---------GHQCLGFTEPGSLNTWAVLDAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEELG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171578 for 1456 contacts (-117.8/contact) +
2D Compatibility (PS) -19931 + (NN) -2043 + (LL) 8936
1D Compatibility (HY) -8800 + (ID) 2400
Total energy: -195816.0 ( -134.49 by residue)
QMean score : 0.451
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