Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGYWRQRRALGGRRT-AVRAPRGRLLLWCAQARRHPLS--RRMESSMTLSLD--LLLSLCTALAI-GLLIGAERGWQERDHEDAR-QIAGIRTFSLAGLLGGFATLLAGELGSAV----------WVALLLA-LAALAVAGYVSDVRRGGDQGMTTEIALLMTFLLGSLALTEQRLLAAAGGIVLTLLLSLKDKLH-ALLKRLTAEELSGTLKL-L-FISVVLLPV--LPNQGYGP-WAFFNPYLTWWMVVLIAALGFSAYLAIRLIGSRKGLLLTAVLGGLVSSTVMTLTLARLRER-MPDALLA-CALLATSALMFPRILVEIGAIHPALLKELALPFAATTLVYLGGTLFHALRGGRASQEAPDEPGLRNPFELLPALRFAALLSAIL-LLVEV-GRRLFGDAGIY-AVALLSGLADVDAITLSLARAAQ-GELDPGVASRGIALAAL-SNSLVKAGLVVLVGGKRLALQTLPFSLAGLLVGALLILL |
| 4QT9 Chain:A ((19-432)) | ---------LSDDALMDTVQRRTFLYFWEGAEPNSGLAPERYHVDGVYPQNDANVVTSGGSGFGIMAILAGIDRGYVTREEGLARMERIVSFLEKADRFHGAYPHWWYGDTGKVKPFGQKDNGGDLVETAFLMQGLLAVHQYYAN-----GNDKEKAIAQRIDRLWREVDWDWYRK---GGQNVLYWHWSPTYGWEMDF-------PIHGYNECMIMYILAAASPTHGVPAAVYHDGWAQNGA-----IVSPHKVEGIELHL--RYQGTEAGPLFWA------QYSFLGLDPVGLKDEYCPSYFHEMRNLTLVNRAYCIRNPKHYKGFGPDC-------WGLTASYSVDGYAAH-------SPNEQDDKGVISPTAALSSIVYTPEYSLQVMRHLYNMGDKVFGPFGFYDAFSETDNWYPQRYLAIDQGPIAVMIENYR----TGLLWKLFMSHPDVQAGLTKL----------------GFNTN------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -335767 for 3309 contacts (-101.5/contact) +
2D Compatibility (PS) -39668 + (NN) -6867 + (LL) 6896
1D Compatibility (HY) -7200 + (ID) 3900
Total energy: -386506.0 ( -116.80 by residue)
QMean score : 0.246
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