Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKTITWTAALLGSMALAGCSGPKTLYQWEGYQAQVHEYFKGESKEAQAQALEADLEKIRAKNGAVPPGYHAQLGLLYSSIGKDDQMVREFETEKALFPESATYMDFLLNNARGGAR
1TJC Chain:A ((189-228))
--------------------------------------------------------------------SVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNL---------
General information:
TITO was launched using:
RESULT:
Template:
1TJC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4900 for 243 contacts (-20.2/contact) +
2D Compatibility (PS) -4279 + (NN) -1279 + (LL) 5024
1D Compatibility (HY) 400 + (ID) 350
Total energy: -5384.0 ( -22.16 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_1TJC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TJC-query.scw
PDB file :
Tito_Scwrl_1TJC.pdb
: