Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRHGLLRSLFAAAALLGAAGVFAASAEPLRLEVYNPGEKAIFAVSSELLVGQREAMLIDAQFSRADAEQLVKRIQAS-GKTLSTIYISHGDPDFYFGLDVLKAAFPEAKILATAQTVAHIQATKDAKLAYWGPILKDNAPTSLVVPEPLKGDQLKLEGHALKVVDLKGP----SPDRTVLWIPSLKTVVGGVLVESGSHVWTADTQTQASRQAWVAMLDRIEALQP--RRVVPGHFTGEEPKGLDGVRFTRDYLKALEAELPKARDSAALVEAMKRRYPNLPGEEGLELSAKVLKGEMQWP |
1KO3 Chain:A ((32-227)) | --------------------------------------DGAVYPSNGLIVRDGDELLLIDTAWGAKNTAALLAEIEKQIGLPVTRAVSTHFHDDRVGGVDVLRAAGVATYASPSTRRLAEVEGNE--------------IPTHSLEGLSSSGDAVRF-----GPVELFYPGAAHSTDNLVVYVPSASVLYGGCAIYELSRT-SAGNVADADLAEWPTSIERIQQHYPEAQFVIPGHGL---PGGLDLLKHTTNVVKAHTN------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KO3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43714 for 1563 contacts (-28.0/contact) +
2D Compatibility (PS) -20723 + (NN) -8656 + (LL) 7184
1D Compatibility (HY) -8000 + (ID) 2450
Total energy: -76359.0 ( -48.85 by residue)
QMean score : 0.432
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