Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSANPLLQAYDLPPFSSIRPEHVKPAIERILADNRAAIARLLETQREQPTWKGLVLAMDELNDRLGAAWSPVSHLNAVCNSAELREAYEACLPELSAYSTELGQNRALFEAYEALAKSPEAAGFDVAQKTILEHALRDFRLSGIDLPADKQKRYAEVQSRLSELGSRFSNQLLDATQAWTKHVTDEAALAGLTDSAKAQMKQAAEAKGLDGWLISLEFPSYYAVMTYADDRALREEVYAAYCTRASDQGPNAGQNDNGPVMEEILDLRQELAGLLGFANYAELSLA--TKMAESSDQVLSFLRDLAVRSKPFAARDLEQLRAYAAEQGCTELQSWDAGYYAEKLREARYSVSQEALRAYFPVDKVLSGLFAIVERLYGIQIRELHDFERWHADVRLFEILENGEHVGRF----YFDLYARANKRGGAWMDGARDRRRDAQGRLIDPVAYLVCNFTPAVNGKPALLTHDEVTTLFHEFGHGLHHLLTRV-EHAAASGINGVAWDAVELPSQFMENWCWEPEGLALISAHYETGVALPQDLLEKMLAAKNFQSGMMMVRQLEFSLFDFELHATHG-DGRSVLQVLEGIRDEVAVM-RPP-----AYNRFANSFAHIFAGGYAAGYY-SYKWAEVLSADAFSRFEEEGVFNPDTGRAFREAILARGGSREPMLLFVDFRGR-EPSIDALLRHSGLVGEAA |
| 3AHN Chain:A ((154-542)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEERTL--AQLQPFV-ESPDRDMRKRASEARFTFFQEHE-----EKFDEIYDQLVKVRTAIAQKLGFKNFVELGYARLGRTDYNAEMVAKFRKQVEKHIVPIAVKLRERQRE---RIGVEKLKYYDEAFVFPTGN----PM-PK-GDANWIIENG----KKMY-EELSPET---------------------GEFFRYMIEHELMDLVAKKGKASGGYCTYIENYK--------APF--IFSNFTG---------TSGDIDVLTHEAGHAFQVYESRHYEIPEYNWP---TLEACEIHSMSMEFFTWPW--MKLFFKE--DAEK-----YQ-F--YHLSDALLFLPYGVAVDEFQHFVYENPNATPAERKQAWRAIERKYMPTKDYDGNDYLERGGFWQRQSHIY---TTAFYYIDYTLAQICAFQFWKRSREN---YKEAWNDYLT-LCRQGGSKPFTELV-RVANLISPFEDGCVQSVVGGIEGW |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AHN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136689 for 3004 contacts (-45.5/contact) +
2D Compatibility (PS) -39080 + (NN) -8107 + (LL) 21660
1D Compatibility (HY) -14800 + (ID) 3550
Total energy: -180566.0 ( -60.11 by residue)
QMean score : 0.390
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