Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGEAGQPSEPLNLLAGMAAAPWDYDFFQALRRIECESPQLPRLGHSVRLADDPLRLGQKPDCTFAPSTLASVSQAGTAAVPRLDQFFFGLTGPNG-PLPLHLTEYARERQRNVNDATFKRFMDVFHHRLLTLFYRAWAEARPEISHDR-IDDDYWSARLAALSGRGMPSLRGREPLADTARYYYTGHLAAQTRYPDGLRVILAEYFEVPVAVEEYVGQWLELPERSRLGVDSTSLGMDVCLGTHVWDRQHKFRLRLGPLDLDQYQRFLPDGDHFVELAAWVAEYLGEELDWDVNLVLQRHEVPPLGLQGGGRLGFNTWLGDPGQDARDLLLARQYATARPHEHKEKEHE |
2GV5 Chain:C ((638-710)) | --------------------------------------------------------------------------------------------GPLGSKLNDILHVYEKSKERELQSQLFNAWRNRFCFYTEECNIQAISKRNYQLE--KMVLKKFRERLLEIVKSEE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1056 for 274 contacts (-3.9/contact) +
2D Compatibility (PS) -7842 + (NN) -4466 + (LL) 16424
1D Compatibility (HY) -800 + (ID) 550
Total energy: 1710.0 ( 6.24 by residue)
QMean score : 0.052
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