Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPIFPAAPPGSTGSRAVRCRSTERGGPDMELLNATPLAAAYNQGLDAEGRESLVVIAKGSFDLPLDGREARLLDEQQTLLMVDEFYGEPGFSA-PRRECEFVPFKPFCDVLVLG-SAQAPGGRPVQQLTAGIRVGR----VSKALTVHGPRQWEPGLLGAGAGVAQPFQSQDISYASAFGGSHASPDNPGFMDCYMANPAGCGWFPRSADTAEIVGTPMPATEKLGEPVDSPHGRFTPMALGPLGRHWQARVGFAGRYDDAWLAE-RFPFLPADFDERYFQSAPADQWTDHLRGGEEVLLLNLTGEERAAFRVPRREVPVTFFLKKGGHETAQARIDTLLVDCDARRVEV-TWRIRRPLKRNLF-EIAQVLVGSKSAAWWRAR----ELGKDYYPSLAALARSRQAEEDEA |
| 4E5V Chain:A ((2-281)) | -----------------------------------------------RKPIKTLLITGQNNHNWQVSHVVLKQILENSGRFDVDFVISPEQGKDMSGFVLDFSPY----QLVVLDYNGDSWPEETNRRFLEYVQNGGGVVIYHAADNAFSKWPEFNRICALGGW--EGRNENSGPYVYWKDGKLVKDSSAGPGGSHG---------RQHEYVLNGRDKVHPVVKGLPL--------------------------KWRHAKDELYDRMRGP-----------------------GNIRDILYTAYSDKETNGSG---REEPLVFTVDYGN----------------ARIFHTMLGHAGATTEDNIAMQCTGFQVLLLRGAEWAATGKVTQKVPKDFPTETTCSYRKDYKEN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41196 for 2211 contacts (-18.6/contact) +
2D Compatibility (PS) -28114 + (NN) -10885 + (LL) 6072
1D Compatibility (HY) -400 + (ID) 1750
Total energy: -76273.0 ( -34.50 by residue)
QMean score : 0.250
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