Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDAHRLSIAAIVDQHAEEAAFLALLRDYAVRAPHYDLEELAELDQRIEAHLDGLAIAGQAGHDALLEQLDAHAQGEAFALAVLAMQAGD--D------ALIGRMRACLAAS-PEARRGFAAALGWLDWD-----------QARPWVERLLASPEPLFRAIGLAACGMHRHD-------PGPALLSALGHADPAVLARAARTAGELRR-------------RDLMANIRAYRAHDDPSLRFWANWATAQMGDE--EALGPLR-AF---AGQPGPFQLPATMVLLAWQPRDTS---MAWIRQLMQ--AADTRRIGIQATGLFGD------PVAVPWLIQQMRDES--LARVAGEAFSLITGADLALLDLELEALPDYDPGPNDDLDDDNVALDDDENLSWPEAERVSAWWRDNGARFVAGRAYLLGEPLGEARCRQVLRDGQQRQRMAAACLLARFVPNLPLFPTGAPVRRQLDLF
2VGL Chain:B ((130-420))--------------------------------------------------------------------LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLL-SGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDP


General information:
TITO was launched using:
RESULT:

Template: 2VGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102161 for 1717 contacts (-59.5/contact) +
2D Compatibility (PS) -25509 + (NN) -18218 + (LL) 6576
1D Compatibility (HY) -10000 + (ID) 1850
Total energy: -151162.0 ( -88.04 by residue)
QMean score : 0.278

(partial model without unconserved sides chains):
PDB file : Tito_2VGL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VGL-query.scw
PDB file : Tito_Scwrl_2VGL.pdb: