Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHVSKVFPSLRDTL-PRDLMASVVVFLVALPLCMGIAIASGMPPAKGLLTGIVGGLVVGFLAGSPLQVSGPAAGLAVLVFELVRTYGVAMLGPILLLAGAIQLLAGR-LRLGCWFRVTSPAVVYGMLAGIGILIVLSQLHVMLDLAPKASGLD-NLLAFP-QAAFAALGSLGMDSGLDAALLGLGTIAVMWGWDKLRPQRLRFLPGALLGVSLATLASLWLA-LDVRRVEVPANLGEAIVWLRPADLLALADPSLLLAAVVVAFIASAETLLSAAA-VDRLH-DGPRSDMDRELSAQGVGNMLCGLLGALPMTGVIVRSSAN-VNAGARTRASAIFHGLWLLAFV-LLLGS-LLRQIPVASLAGVLVYTGVKLVDFKALGNLSRYGRMPMLVYAATALAI-VFTDLLTGVLVGFALTLLKL---VLKAARLKIALRYTGEHEAEL-----RLSGAATFLKVPALSRVLDEVK--PGTTLHVPMDNLSYVDHACMELLED-WGRMAPVQGSRLVIEPRALKR-RLEGRLRGSVGLGGARNGGAVSPG |
| 1SZQ Chain:A ((11-483)) | -EFDREIVDIVDYVMNYEISSKVAYDTAHYCLLDTLGCGLEALEYPACKK-LLGPIVPGTVVPNGVRVPGTQFQLD---------------------PVQAAFNIGAMIRWLDFNDTWLAAEWGHPSDNLGGILATADWLSRNAVASGKAPLTMKQVLTAMIKAHEIQGCIALENSFNRV-----------GLDH----------VLLVKVASTAVVA---EMLGLTREEILNAVSLAWV--DGQSLRTYRHAPNTGTRKSWAAGDATSRAVRLALMAKTGEMGYPSALTAPVWG------FYDVSFKGESFRFQRPYGSYVMENVLFKISFPAEFHSQTAVEAAMTLYEQMQAAGKTAADIEKVTIRT-----HEACIRIIDKKGPLNNPADRDHCIQYMVAIPLLFGRLTAADYEDNVAQDKRIDALREKINCFEDPAFTADYHDPEKRAIANAITLEFTDGTRFEEVVVEYPIGHARRRQDGIPKLVDKFKINLARQFPTRQQQRILEVSLDRARLEQMPVNEYLDLYVI------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SZQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220747 for 3693 contacts (-59.8/contact) +
2D Compatibility (PS) -45175 + (NN) -1404 + (LL) 6256
1D Compatibility (HY) 32000 + (ID) 1200
Total energy: -230270.0 ( -62.35 by residue)
QMean score : 0.155
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