Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASHEHYYVPAQSKWPIIASIGLLVTVFGLGTWF--NDLTAGHKESHGPWIFFVGGLIIAYMLFGWFGNVIRESR-AGLYSAQMDRSFRWGMSWFIFSEVMFFAAFFGALFYVRHFAGPWLGGEGAKGVAHMLWPNFQYSWPLLQTPDPKLFPPPSAVIEPWKLPLINTILLVTSSFTVTFAHHALKKNKRGPLKAWLALTVLLGIAFLILQAEEYVHAYNELGLTLGAGIYGSTFFMLTGFHGAHVTLGALILGIMLIRILRGHFDAEHHFGFEAASWYWHFVDVVWIGLFIFVYVI
2Y69 Chain:C ((8-257))------YHMVNPSPWPLTGALSALLMTSGLTMWFHFNSMT----------LLMIGLTTNMLTMYQWWRDVIRESTFQGHHTPAVQKGLRYGMILFIISEVLFFTGFFWAFYHSSLAPTPELGG----------------CWP----------PTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGDRKHMLQALFITITLGVYFTLLQASEYY----EAPFTISDGVYGSTFFVATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNHHFGFEAAAWYWHFVDVVWLFLYVSIYWW


General information:
TITO was launched using:
RESULT:

Template: 2Y69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -226397 for 1773 contacts (-127.7/contact) +
2D Compatibility (PS) -25557 + (NN) -11532 + (LL) 2312
1D Compatibility (HY) -28800 + (ID) 5200
Total energy: -295174.0 ( -166.48 by residue)
QMean score : 0.270

(partial model without unconserved sides chains):
PDB file : Tito_2Y69.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y69-query.scw
PDB file : Tito_Scwrl_2Y69.pdb: