Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------------------MLKVAIVLLLLATLVSLFSGLFFLVKDQGHGSRVVNSLTVRVVLAAATLVLVAWGFYSGELNSHAPWHF-
2LOM Chain:A ((1-93))
MSTDTGVSLPSYEEDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVVGAMTVGMGYSMYREFWAKPKP
General information:
TITO was launched using:
RESULT:
Template:
2LOM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33864 for 312 contacts (-108.5/contact) +
2D Compatibility (PS) -7198 + (NN) -5462 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -48074.0 ( -154.08 by residue)
QMean score : 0.293
(partial model without unconserved sides chains):
PDB file :
Tito_2LOM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LOM-query.scw
PDB file :
Tito_Scwrl_2LOM.pdb
: