Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLAIPMPERPRRARGRLQLLAIIGLVVGPMLLASAMYKWNFWVPQGRSYSGALIGNGQTPADLGVQGR--------SQGEQWQLLVTAPGTCGEDCQQLVYLARQINIALGREASRAGHALAAS-G----E--LPADFANL-VR-QDYPRLQRYGLDP---AL---------------YDKAGGGERPLLWVVDPHGNLVLRYDAKANGKKLLKDVQLLLKLSHIG |
| 3DWV Chain:A ((9-171)) | ------------------------------------------------------MSAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGY-TKGGYETATTLYNKYKS--QGFTVLAFPSNQFGGQEPGNEEE-IKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48871 for 864 contacts (-56.6/contact) +
2D Compatibility (PS) -13807 + (NN) -9305 + (LL) 4768
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -70065.0 ( -81.09 by residue)
QMean score : 0.369
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