Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTVVSF-RADDALVAALDELARATHRDRPYHLRQALAQYLERQQWQVAAIDEGLADANA--GRLLEHIEIEKRWGLQ
3H87 Chain:C ((2-71))
--SDVLIRDIPDDVLASLDAIAARLGLSRTEYIRRRLAQDAQTARVT--VTAADLRRLRGAVAGLGDPELMRQAWR--
General information:
TITO was launched using:
RESULT:
Template:
3H87.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6350 for 281 contacts (-22.6/contact) +
2D Compatibility (PS) -7497 + (NN) -4617 + (LL) 500
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -20614.0 ( -73.36 by residue)
QMean score : 0.346
(partial model without unconserved sides chains):
PDB file :
Tito_3H87.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H87-query.scw
PDB file :
Tito_Scwrl_3H87.pdb
: