Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLSLEPRG-----RQSRWMLLASPLLAGLLTLVCGALLFACLGHDPWQTLHTVLVQPLSDLY--GLGELL----VKAMPILLCALGL--------------ALAYQARVWNIGAE--------------GQLLVGALAGSA-VAIQLLDWQSRWALAWVLLAG----TAAGALWAGFAAWLRTRFNANEI-LTTIMLNYIALNLLLYGVHGPLKDPDGFNFPQSALFGEASRLPALFEDSRVH--------------LGALFGLLALAAVWVLAQRSFLGFQVRVLGLDRRAAGFVGFREKRLVWFVLLFS----GALAGLAGVCEVAGPIGQLVPQVSPGYGYAAITVAFLGRLNPFGILCASLLMALLYLGGEAAQMSL-----NLPLALSGLF---QGMML-------------FFLLACDVLILYRPRLHGRWRKRPALRDALA-------------------- |
| 4MR0 Chain:A ((114-571)) | TALSVKDYGAVGDGIHDDRQAIQDAIDAAAQGLGGGNVYFP---EGTYLVKEIVFLKSHTHLELNEKATILNGINIKNHPSIVFMTGLFTDDGAQVEWGPTEDISYSGGTIDMNGALNEEGTKAKNLPLINSSGAFAIGNSNNVTIKNVTFKDSYQGHAIQIAGSKNVLVDNSRFLG-QALPKTMKDGQIISKESIQIEPLTRKGFPYALNDDGKKSENVTIQNS-YFGKSDKSGELVTAIGTHYQTLSTQNPSNIKILNNHFDNMMYAGVRFT---GFTDVLIKGNRFDKKVKGESVHYRESGAALVNAYSYKNTKDLLDLNKQVVIAENIFNIADPKTKAIRVAKDSAEYLGKVS--DITVTKNVINNNSKETEQPNIELLRVSDNLVVSENSIFGGKEGIVIEDSKGKITVLNNQFYNLSGKYISFIKSNANG---KEPVISDGNFNIVTENGLYKIVTNNLSDKN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MR0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -374872 for 2918 contacts (-128.5/contact) +
2D Compatibility (PS) -35152 + (NN) 19128 + (LL) 1048
1D Compatibility (HY) -9200 + (ID) 3100
Total energy: -402148.0 ( -137.82 by residue)
QMean score : 0.080
|
|
|