Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFSTQDSDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPINLPKTESVAPPEQKDPLVVSIDGAGKLFVNKDEIQPELLESNLAAAKAKDAEVRVQLQADEGVNYGQVAKAMASIERAGITRLAVITAR
3WWM Chain:A ((2-34))
------------------------------------------------------------------------------------------------IVVKVGGAEGINYEAVAKDAASLWKEGVKLLLVHGGS
General information:
TITO was launched using:
RESULT:
Template:
3WWM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11808 for 145 contacts (-81.4/contact) +
2D Compatibility (PS) -3621 + (NN) -809 + (LL) 7168
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -13320.0 ( -91.86 by residue)
QMean score : 0.636
(partial model without unconserved sides chains):
PDB file :
Tito_3WWM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WWM-query.scw
PDB file :
Tito_Scwrl_3WWM.pdb
: