Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEVTKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFLTPSEKYSFISSTLVREIAALGGDISKFVHPAVADALAERFKR
3LCJ Chain:A ((1-157))
MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIA-GVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRLN-
General information:
TITO was launched using:
RESULT:
Template:
3LCJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121122 for 1228 contacts (-98.6/contact) +
2D Compatibility (PS) -17590 + (NN) -11587 + (LL) -40
1D Compatibility (HY) -16400 + (ID) 3200
Total energy: -169939.0 ( -138.39 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_3LCJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LCJ-query.scw
PDB file :
Tito_Scwrl_3LCJ.pdb
: