Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPAMRTGLLCALLGVTAPAWAEYVTVISFGGANKEAQETAFYKPFKSATGNRVVHGSY--NGDLAKLKRMVEISHVSWDVVEVEAPELARGCEEGLFEKLDMAKVGDPADFVPGA---VQPCGVGIFVWTTLLAYNPGKVAGSPQGWADFWDVKKFPGKRG----LRWGAKYSLE-FALMADGVAPKDVYQTLATPAGVERAFRKLDELKPYI-HWWKSGQDPVRDLADGTVVMSSAYNGRIAAAQA-EKQRLAMVWS--GGVYDFDFWALPVGVWKKQLAEEFIRFASQPEQQKAFAENIAYGPANRKAVGLLDPQVAANLPTAPQNMQNAVGMNVAFWAEHGEALEQRFQNWAKR |
| 3PU5 Chain:A ((3-323)) | -------------------LADDHIYVTSSGGSFLENVRKHMAEPFEKQSGVKVTLVPGTNPAHALKILSSR--GTPPYDVAAFGGNDMYRLIRAKKLAQVDEKSVPSLADVPEKFKADWEGCGSLYDYSSVGIAYRPDKIQGGVKSWKEFVERT-VAGEFGKQVFFNNLSSNVRGAEVLSMFGKIYGS------GYGDIEASIATLERMKPHIFKFFTAFNDPVVLLTSGEGAIGPGWDGRTFIAEDSTKGMVKWVDPTEGAVSSGPVMAVVKGGK-EDLAKAFMNYALGEEAQKAFCEAMYYGAVNRKVQ--YSEKLKHRLPS----IDSVQLVDTALLIKNMSALLDLWNKRIA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PU5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113822 for 2585 contacts (-44.0/contact) +
2D Compatibility (PS) -33847 + (NN) -18593 + (LL) 2880
1D Compatibility (HY) -8800 + (ID) 3450
Total energy: -175632.0 ( -67.94 by residue)
QMean score : 0.391
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