Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MQFFLRYAYAPLFWSGF-IGLATWQV----GYRQASHAWLVALFLGALGLSFLAERRLPYQPRWNRP--HADRLRDVLHASVNESLNALGILALPLLAGVLGFWPVWPQAWPLWLQLLLAIVLADLGITLVHYASHRSALLWRLHAVHHSVQRLYGF--------------------------------NGLMKHPLHLGLEALGGTLPLLLLGVPQTVAALLAFAIGIQ---LLLQH------SNVDMRIGGLRHVFA----------------------WAPLHRLHHIRYGRAGDVNFALFFSVWDRLLGTAL--HRPDYRLDSTDMGIGDQPDYPRDYAGQLLAPFRDLPRSRHVPQ-PPEGLGRSAGQA-------------------------------- |
| 2X2Z Chain:A ((6-416)) | GNPFQANVEMKTFMERFNLTHHHQSGIYVDLGQDKEVDGTLYREPAGLCPIW----GKHIELQQPDRPPYRNNFLEDVPTEKEYKQSGNPLPG-GFNLNFVTPSGQRISPFPMELLENSNIKASTDLGRCAEFAF---KTVAMDKNNKATKYRYPFVYDSKKRLCHILYVSMQLMEGKKYCSVKGEPPDLTWYCFKPRKSVTENHHLIYGSAYVGENPDAFISKCPNQALRGYRFGVWKKGRCLDYTELTDTVIERVESKAQCWVKTFENDGVASDQPHTYPLTSQASWNDWWPLHQSDQPHSGGVGR-NYGFYYVDTTGEGKCALSDQVPDCLVSDSAAVSYTAAGSLSEETPNFIIPSNTPPTPETALQCTADKFPDSFGACDVQACKRQKTSCVGGQIQSTSVDCTADEQNEC |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184046 for 2221 contacts (-82.9/contact) +
2D Compatibility (PS) -29838 + (NN) -6429 + (LL) 816
1D Compatibility (HY) 1200 + (ID) 2250
Total energy: -220547.0 ( -99.30 by residue)
QMean score : ?
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