Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MRAVVELLAGARRLVIFTGAGVSAESGIPTFRDALGGLWARYDPAALATPAAFADDPALVWGWYEWRRLKVLGVQPNPAHRAIAALSGRIA----NTRLVTQNVDDLHERAGSRDVLHLHGSLHAPRCATCA---AAYRDAL---------PDSVEPEEGRRIE-PPRC--PACGGQVRPGVVWFGEALPEAALREAFAAACECDLLLSVGTSGVVQPAARIPGLALEHGASVVHVNPQPVRTRHPREHCLVGPAGEVLPELLRRAFPG 4UTR Chain:A ((13-274)) LTAFREHFAKAKHIAIITGAGVSAESGVPTFRGP-GGFWRKWQAQDLATPEAFSRDPSLVWEFYHYRREVMRSKMPNPAHLAIAECEARLGQQGRSVVIITQNIDELHHRAGSKHVYEIHGSLFKTRCMSCGEVKANHKSPICPALDGKGAPDPNTKEARIPVELLPRCERKSCNGLLRPHVVWFGETLDSDILTAVERELEKCDLCLVVGTSSIVYPAAMFAPQVASRGVPVAEFNMECTPATQ--KYHFEGPCGSTLPPALE-----

General information: TITO was launched using: RESULT: Template: 4UTR.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output 3D Compatibility (PKB) -145134 for 1926 contacts (-75.4/contact) + 2D Compatibility (PS) -26375 + (NN) -15233 + (LL) 472 1D Compatibility (HY) -16000 + (ID) 5200 Total energy: -207470.0 ( -107.72 by residue) QMean score : 0.516

(partial model without unconserved sides chains): PDB file : Tito_4UTR.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4UTR-query.scw PDB file : Tito_Scwrl_4UTR.pdb: