Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKALKTLFIATALLGSAAGVQAADNFVGLTWGETSNNIQKSKSLNRNLNSPNLDKVIDNTGTWGIRAGQQ-FEQGRYYATYENISDTSSGNKLRQQNLLGSYDAFLPIGDNNTKLFGGATLGLVKLEQDGKG---FKRDSDVGYAAGLQAGILQE----LSKNASIEGGYRYLRTNASTEMTPHGGNKLGSLDLHSSSQFYLGANYKF |
| 2JMM Chain:A ((4-150)) | ---------------------DNTWYTGAKLGWSQYSRE-------------------NQLGAGAFGGYQVNPYVGFEMGYDWLGRMPR--KAQGVQLTAKLGYPKLGT-DDLDIYTRLGGMVWRADTSDKDGNGYISAAEASVSPVFAGGVEYVIRRRITPEIATRLEYQWTNNA--S----------------DNGMLSLGVSYRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 28940 for 932 contacts (31.1/contact) +
2D Compatibility (PS) -13616 + (NN) 2408 + (LL) 2652
1D Compatibility (HY) -1200 + (ID) 800
Total energy: 18384.0 ( 19.73 by residue)
QMean score : 0.068
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