Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQRIRIIDSHT----GGEPTRLVIGGFPDLGQGDMAERRRLLGERHDAWRAACILEPRGSDVLVGALLCAPVDPEACAGVIFFNNSGYLGMCGHGTIGLVASLAHLGRIGP-GVHRIETPVGEVEATLHEDGSVSVR-NVPAYRYR----RQVSVEVPGIG-RVSGDIAWGGNWFFLVAG-HG--Q-RLAGDNLDALTAYTVAVQQALDDQDIRGEDGGAIDHIELFAD------DPHADSRNFVLCPGKAY-DRSPCGTGTSAKLACLAADGKLLP-GQPWRQASV---IGSQFEGRYEWLDGQPGGPIVPTIRGRAHVSAEATLLLADDDPFAWGIRR |
| 1YM5 Chain:A ((4-295)) | MVPFKQVDVFTEKPFMGNPVAVINFLEIDENEVS-QEELQAIANWTNLSET--------------TFLFKPSDKKYDYKLRIFTPRSELPFAGHPTIGSCKAFLEFTKNTTATSLVQECKIGAVPITINEG-LISFKAPMADYESISSEMIADYEKAIGLKFIKPPALLHTGPEWIVALVEDAETCFNANPNFA-MLAHQT---------------KQNDHVGIILAGPKKEAAIKNSYEMRAFA--PVINVYEDPVCGSGSVALARYLQEVYKFEKTTDITISEGGRLKRNGLMLASIKKEA---DNSTSYYIAGHATTVIDGKIKVH----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1YM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -112773 for 2270 contacts (-49.7/contact) +
2D Compatibility (PS) -28624 + (NN) -9884 + (LL) 2268
1D Compatibility (HY) -1600 + (ID) 2100
Total energy: -152713.0 ( -67.27 by residue)
QMean score : 0.357
|
|
|