Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MARKNAVKDNLEQIQHQSYSELQELLSEANSMLADSAAFAGDKADSARARIGALLEKANDALGKGGSAVAERSRHAVDATESYIGANPWQTVAITTAVGLLAGFLLGRRS |
2LSE Chain:A ((4-23)) | --------------------ERKKLLEKLEKILDEVTDGAPDEARERIEKLAKDVKDELEEGDAKNMIEKFRDEMEQMYKDAPNAVMEQLLEEIEKLLKKAGSLVPRGSY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LSE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 63 for 75 contacts (0.8/contact) +
2D Compatibility (PS) -2252 + (NN) -1709 + (LL) 1604
1D Compatibility (HY) -800 + (ID) 250
Total energy: -3344.0 ( -44.59 by residue)
QMean score : 0.698
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