Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPLLHAFAPGVMALMLLLPQAAQAKEVAPQQKLSNVVILATGGTIAGAGASAANSATYTAAKVPVDQLLASVPQLKDIANVRGEQVFQIASESFTNENLLELGKTVAKLADSDDVDGIVITHGTDTLEETAYFLTLVEHTEKPIVVVGSMRPGTAMSADGMLNLYNAVAVAGDKSARGKGVLITMNDEILSGRDASKMVNIKTEAFKS-PWGPLGMVVEGKSYWFRAPVKRHTVNSEFDIKQISALAP-VEIAYSYGNVSDTAYKALAQAGAKAIIHAGTGNGSVPARVVPTLQELRKQGVQIIRSSHVNAGGFVLRNAEQPDDKNDWIVAHDLNPQKARILAAVAMTKTQDSKELQRIFWEY |
| 2WT4 Chain:A ((5-332)) | ---------------------------------LPTIALLATGGTIAGSG--------------GVKELLKAIPSLNKIARIQGEQVSNIGSQDMNEEIWFKLAQRAQELLDDSRIQGVVITHGTDTLEESAYFLNLVLHSTKPVVLVGAMRNASSLSADGALNLYEAVSVAVNEKSANKGVLVVMDDTIFSVREVVKTHTTHVSTFKALNSGAIGSVYYGKTRYYMQPLRKHTTESEFSLSQLKTPLPKVDIIYTHAGMTPDLFQASLNSHAKGVVIAGVGNGNVSAGFLKAMQEASQMGVVIVRSSRVGSGG--VTSGEIDDKAYGFITSDNLNPQKARVLLQLALTKTNDKAKIQEMFEEY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141440 for 2718 contacts (-52.0/contact) +
2D Compatibility (PS) -34297 + (NN) -22828 + (LL) 4796
1D Compatibility (HY) -26400 + (ID) 6750
Total energy: -226919.0 ( -83.49 by residue)
QMean score : 0.731
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