Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQHKRSRAMASPRSPFLFVLLALAVGGTANAHDDGLPAFRYSAELLGQLQLPSVALPLNDDLFLYGRDAEAFDLEAYLALNAPALRDKSEYLEHWSGYYSINPKVLLTLMVMQSGPLGAPDERALAAPLGRLSAKRGFDAQVRDVLQQLSRRYYGFEEYQLRQAAARKAVGEDGLNAASAALLGLLREGAKVSAVQGGNPLGAYAQTFQRLFGTPAAELLQPSNRVARQLQAKAALAPPSNLMQLPWRQGYSWQPNGAHSNTGSGYPYSSFDASYDWPRWGSATY----SVVAAHAGTVRVLS-----RCQVRVTHPSGWATNYYHMDQI-QVSNGQQVSADTKLGVYAGNINTALCEGGSS----TG---PHLHFSLLYNG----AFVSLQGASFGPYRINVGTSNYDNDCRRYYFYNQSAGTTHCAFRPLYNPGLAL |
| 3NYY Chain:A ((124-237)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GHEGTDIMAE------KNTPGYYPVVSMTDGVVTEKGWLEKGGWRIGITAPTGAYFYYAHLDSYAELEKGDPVKAGDLLGYMGDS--------GYGEEGTTGEFPVHLHLGIYLKEGTEEISVNPYPVLRYAENARIKCVYS------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NYY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53536 for 623 contacts (-85.9/contact) +
2D Compatibility (PS) -10168 + (NN) -2974 + (LL) 18088
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -53740.0 ( -86.26 by residue)
QMean score : 0.492
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