Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MREYQRLKGFTDN---LELRRRNRATVEHYMRMKGAERLQRHSLFVEDGCAGNWTTESGEPLVFRGHESLRRLAEWLERCFPDWEWHNVRIFETEDPNHFWVECDGRGKALVPGYPQGYCENHYIHSFELENGRIKRNREFMNPMQKLRALGIAVPQIKRDGIPT
3JUN Chain:B ((28-180))
-------ENTSENRAQVAARQHNRKIVEQYMHTRGEARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPDWVWTDIQIFETQDPNWFWVECRGEGAIVFPGYPRGQYRNHFLHSFRFENGLIKEQREFMNPCEQFRSLGIEVPEVRR-----
General information:
TITO was launched using:
RESULT:
Template:
3JUN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32003 for 983 contacts (-32.6/contact) +
2D Compatibility (PS) -16204 + (NN) -5842 + (LL) 768
1D Compatibility (HY) -13200 + (ID) 3950
Total energy: -70431.0 ( -71.65 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_3JUN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JUN-query.scw
PDB file :
Tito_Scwrl_3JUN.pdb
: