Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNAMALTLAGLLAAPSLGFAAAPDAVMVFARQGD--------KGSVSVG-DKHF-----RTQAFKVRLVNAAKSEISLK---NSCLVAQSAAGQSFRLDTVD-----EELT---ADTLKPGASVEGDAIFASEDDAVYGASLVRLSDRCK |
1YEW Chain:A ((210-329)) | ------ATILIVVMAMSSANSKYPITIPLQAGTMRGMKPLELPAPTVSVKVEDATYRVPGRAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLAPGETRTVDVTASDAAWEVYRLSDIIYDPDSR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YEW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5687 for 421 contacts (-13.5/contact) +
2D Compatibility (PS) -9820 + (NN) 1713 + (LL) 688
1D Compatibility (HY) -800 + (ID) 900
Total energy: -14806.0 ( -35.17 by residue)
QMean score : 0.179
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